Academic Articles & Research Papers

HRCTCov19-a high-resolution chest CT scan image dataset for COVID-19 diagnosis and differentiation

Abstract Introduction Computed tomography (CT) was a widely used diagnostic technique for COVID-19 during the pandemic. High-Resolution Computed Tomography (HRCT), is a type of computed tomography that enhances image resolution through the ...

Topological Data Analysis: Foundations, Algorithms, and Emerging Applications

Topological data analysis (TDA) has evolved into a flexible and robust paradigm for obtaining qualitative, geometry-inspired insights from high-dimensional, noisy, and complex data. Grounded in algebraic topology, geometry, statistics, and ...

Feasibility and effectiveness of automatic deep learning network and radiomics models for differentiating tumor stroma ratio in pancreatic ductal adenocarcinoma

Abstract Objective This study aims to compare the feasibility and effectiveness of automatic deep learning network and radiomics models in differentiating low tumor stroma ratio (TSR) from high TSR in pancreatic ductal adenocarcinoma (PDAC)...

Basics of Deep Learning: A Radiologist's Guide to Understanding Published Radiology Articles on Deep Learning

Artificial intelligence has been applied to many industries, including medicine. Among the various techniques in artificial intelligence, deep learning has attained the highest popularity in medical imaging in recent years. Many articles on...

Automated deep bottleneck residual 82-layered architecture with Bayesian optimization for the classification of brain and common maternal fetal ultrasound planes

Despite a worldwide decline in maternal mortality over the past two decades, a significant gap persists between low- and high-income countries, with 94% of maternal mortality concentrated in low and middle-income nations. Ultrasound serves ...

Single-cell spatial metabolomics with cell-type specific protein profiling for tissue systems biology

Abstract Metabolic reprogramming in cancer and immune cells occurs to support their increasing energy needs in biological tissues. Here we propose Single Cell Spatially resolved Metabolic (scSpaMet) framework for joint protein-metabolite pr...

Prediction of lymph node metastasis in papillary thyroid carcinoma using non-contrast CT-based radiomics and deep learning with thyroid lobe segmentation: A dual-center study

Objectives: This study aimed to develop a predictive model for lymph node metastasis (LNM) in papillary thyroid carcinoma (PTC) patients by deep learning radiomic (DLRad) and clinical features. Methods: This study included 271 thyroid lobes...

Deep learning for cardiovascular medicine: a practical primer

Deep learning (DL) is a branch of machine learning (ML) showing increasing promise in medicine, to assist in data classification, novel disease phenotyping and complex decision making. Deep learning is a form of ML typically implemented via...

Deep Learning in Medical Imaging: General Overview

The artificial neural network (ANN)-a machine learning technique inspired by the human neuronal synapse system-was introduced in the 1950s. However, the ANN was previously limited in its ability to solve actual problems, due to the vanishin...

Integrative multiomics-histopathology analysis for breast cancer classification

Abstract Histopathologic evaluation of biopsy slides is a critical step in diagnosing and subtyping breast cancers. However, the connections between histology and multi-omics status have never been systematically explored or interpreted. We...

Deep learning-enabled medical computer vision

A decade of unprecedented progress in artificial intelligence (AI) has demonstrated the potential for many fields-including medicine-to benefit from the insights that AI techniques can extract from data. Here we survey recent progress in th...

Deep learning and radiomics in precision medicine

INTRODUCTION: The radiological reading room is undergoing a paradigm shift to a symbiosis of computer science and radiology using artificial intelligence integrated with machine and deep learning with radiomics to better define tissue chara...

Vison transformer adapter-based hyperbolic embeddings for multi-lesion segmentation in diabetic retinopathy

Abstract Diabetic Retinopathy (DR) is a major cause of blindness worldwide. Early detection and treatment are crucial to prevent vision loss, making accurate and timely diagnosis critical. Deep learning technology has shown promise in the a...

MalariaSED: a deep learning framework to decipher the regulatory contributions of noncoding variants in malaria parasites

Abstract Malaria remains one of the deadliest infectious diseases. Transcriptional regulation effects of noncoding variants in this unusual genome of malaria parasites remain elusive. We developed a sequence-based, ab initio deep learning f...

Deep learning in cancer diagnosis, prognosis and treatment selection

Deep learning is a subdiscipline of artificial intelligence that uses a machine learning technique called artificial neural networks to extract patterns and make predictions from large data sets. The increasing adoption of deep learning acr...

Deep learning approaches to biomedical image segmentation

The review covers automatic segmentation of images by means of deep learning approaches in the area of medical imaging. Current developments in machine learning, particularly related to deep learning, are proving instrumental in identificat...

Effective Palliative Care for Hospice Transitions.

Rapid profiling of carcinogenic types of Helicobacter pylori infection via deep learning analysis of label-free SERS spectra of human serum

WHO classified Helicobacter pylori as a Group I carcinogen for gastric cancer as early as 1994. However, despite the high prevalence of H. pylori infection, only about 3 % of infected individuals eventually develop gastric cancer, with the ...

Longitudinal Dynamic MRI Through Multisession Joint Reconstruction Incorporating Patient-Specific Prior Image Information.

A call for deep-learning healthcare