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Machine learning and deep learning applications in microbiome research

Ricardo Hernández Medina, Svetlana Kutuzova, Knud Nor Nielsen, Joachim Johansen et al. • ISME Communications (2022)

The many microbial communities around us form interactive and dynamic ecosystems called microbiomes. Though concealed from the naked eye, microbiomes govern and influence macroscopic systems including human health, plant resilience, and bio...

OPENALEX cc-by DOI: https://doi.org/10.1038/s43705-022-00182-9 PMC: 9723725

The unreasonable effectiveness of deep learning in artificial intelligence

Terrence J. Sejnowski A B • Proceedings of the National Academy of Sciences (2020)

Deep learning networks have been trained to recognize speech, caption photographs, and translate text between languages at high levels of performance. Although applications of deep learning networks to real-world problems have become ubiqui...

OPENALEX Open Access DOI: https://doi.org/10.1073/pnas.1907373117 PMC: 7720171

Single-cell spatial metabolomics with cell-type specific protein profiling for tissue systems biology

Thomas Hu, Mayar Allam, Shuangyi Cai, Walter Henderson et al. • Nature Communications (2023)

Abstract Metabolic reprogramming in cancer and immune cells occurs to support their increasing energy needs in biological tissues. Here we propose Single Cell Spatially resolved Metabolic (scSpaMet) framework for joint protein-metabolite pr...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41467-023-43917-5

Deep Learning in Medical Imaging: General Overview

June‐Goo Lee, Sanghoon Jun, Young-Won Cho, Hyunna Lee et al. • Korean Journal of Radiology (2017)

The artificial neural network (ANN)-a machine learning technique inspired by the human neuronal synapse system-was introduced in the 1950s. However, the ANN was previously limited in its ability to solve actual problems, due to the vanishin...

OPENALEX cc-by-nc DOI: https://doi.org/10.3348/kjr.2017.18.4.570 PMC: 5447633

Understanding tourist engagement with traditional dwellings through multimodal deep learning: a case study of the Gao Family Compound, Xi’an

Liyue Wu, Qinchuan Zhan, Yanjun Li • Humanities & Social Sciences Communications (2026)

Abstract This study applies a multimodal deep learning approach to examine tourist engagement with traditional architectural heritage. The Gao Family Compound in Xi’an serves as a representative case. Social-media texts and images from Weib...

DOAJ Open Access (DOAJ) DOI: 10.1057/s41599-026-07879-5

Deep learning-based recognition and segmentation of intracranial aneurysms under small sample size

Guangyu Zhu, Xueqi Luo, Tingting Yang, Li Cai et al. • Frontiers in Physiology (2022)

The manual identification and segmentation of intracranial aneurysms (IAs) involved in the 3D reconstruction procedure are labor-intensive and prone to human errors. To meet the demands for routine clinical management and large cohort studi...

DOAJ Open Access (DOAJ) DOI: 10.3389/fphys.2022.1084202

VulDeePecker: A Deep Learning-Based System for Vulnerability Detection

Zhen Li, Deqing Zou, Shouhuai Xu, Xinyu Ou et al. • Network and Distributed System Security Symposium (2018)

The automatic detection of software vulnerabilities is an important research problem.However, existing solutions to this problem rely on human experts to define features and often miss many vulnerabilities (i.e., incurring high false negati...

OPENALEX Open Access DOI: https://doi.org/10.14722/ndss.2018.23158

Spatiotemporal prediction of sneeze pollutants in enclosed spaces: a CNN-LSTM approach validated by field measurements and CFD-Robotics arm twin system

Mingyu Zhao, Shujia Zhang, Ke Li, Yanru Zhang et al. • Frontiers in Robotics and AI (2026)

Densely populated enclosed environments, characterized by complex thermal stratification and overlapping breathing zones, represent high-risk clusters for the airborne transmission of respiratory pathogens. To address the dual challenges of...

DOAJ Open Access (DOAJ) DOI: 10.3389/frobt.2026.1846010

Deep Learning in Medical Imaging

Mingyu Kim, Jihye Yun, Yongwon Cho, Keewon Shin et al. • Neurospine (2019)

The artificial neural network (ANN), one of the machine learning (ML) algorithms, inspired by the human brain system, was developed by connecting layers with artificial neurons. However, due to the low computing power and insufficient learn...

OPENALEX cc-by-nc DOI: https://doi.org/10.14245/ns.1938396.198 PMC: 6945006

Deep learning in food category recognition

Yudong Zhang, Lijia Deng, Hengde Zhu, Wei Wang et al. • Information Fusion (2023)

Integrating artificial intelligence with food category recognition has been a field of interest for research for the past few decades. It is potentially one of the next steps in revolutionizing human interaction with food. The modern advent...

OPENALEX cc-by DOI: https://doi.org/10.1016/j.inffus.2023.101859

Presenting the students’ academic achievement causal model based on goal orientation

EBRAHIM NASIRI, ALI POUR-SAFAR, MAHDOKHT TAHERI, ABDULLAH SEDIGHI PASHAKY et al. • Journal of Advances in Medical Education and Professionalism (2017)

Introduction: Several factors play a role in academic achievement, individual’s excellence and capability to do actions and tasks that the learner is in charge of in learning areas. The main goal of this study was to present academic ach...

DOAJ Open Access (DOAJ)

Systemic Review and Meta-Analysis: The Application of AI-Powered Drone Technology with Computer Vision and Deep Learning Networks in Waste Management

Tyrone Bright, Sarp Adali, Cristina Trois • Drones (2025)

As the generation of Municipal Solid Waste (MSW) has exponentially increased, this poses a challenge for waste managers, such as municipalities, to effectively control waste streams. If waste streams are not managed correctly, they negative...

DOAJ Open Access (DOAJ) DOI: 10.3390/drones9080550

Rapid profiling of carcinogenic types of Helicobacter pylori infection via deep learning analysis of label-free SERS spectra of human serum

Fen Li, Yu-Ting Si, Jia-Wei Tang, Zeeshan Umar et al. • Computational and Structural Biotechnology Journal (2024)

WHO classified Helicobacter pylori as a Group I carcinogen for gastric cancer as early as 1994. However, despite the high prevalence of H. pylori infection, only about 3 % of infected individuals eventually develop gastric cancer, with the ...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.csbj.2024.09.008

Deep Learning for Identifying Metastatic Breast Cancer

Wang, Dayong, Aditya Khosla, Rishab Gargeya, Humayun Irshad et al. • arXiv (Cornell University) (2016)

The International Symposium on Biomedical Imaging (ISBI) held a grand challenge to evaluate computational systems for the automated detection of metastatic breast cancer in whole slide images of sentinel lymph node biopsies. Our team won bo...

OPENALEX Open Access DOI: https://doi.org/10.48550/arxiv.1606.05718

Book Review: Deep Learning

Kwang Gi Kim • Healthcare Informatics Research (2016)

This book offers a solution to more intuitive problems in these areas. These solutions allow computers to learn from experience and understand the world in terms of a hierarchy of concepts, with each concept defined in terms of its relation...

OPENALEX cc-by-nc DOI: https://doi.org/10.4258/hir.2016.22.4.351

A Survey on Deep Learning for Human Mobility

Massimiliano Luca, Gianni Barlacchi, Bruno Lepri, Luca Pappalardo • ACM Computing Surveys (2021)

The study of human mobility is crucial due to its impact on several aspects of our society, such as disease spreading, urban planning, well-being, pollution, and more. The proliferation of digital mobility data, such as phone records, GPS t...

OPENALEX Open Access DOI: https://doi.org/10.1145/3485125