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Showing 20 of 1,495 academic articles

Deep Learning in Proteomics

Bo Wen, Wen‐Feng Zeng, Yuxing Liao, Zhiao Shi et al. • PROTEOMICS (2020)

Proteomics, the study of all the proteins in biological systems, is becoming a data-rich science. Protein sequences and structures are comprehensively catalogued in online databases. With recent advancements in tandem mass spectrometry (MS)...

OPENALEX cc-by DOI: https://doi.org/10.1002/pmic.201900335 PMC: 7757195

On Definition of Deep Learning

Wenjun Zhang, Guosheng Yang, Yingzi Lin, Chunli Ji et al. • World Automation Congress (WAC) (2018)

Deep learning has become a buzz word recently. However, there is a lack of unified definition to deep learning in literature. The goal of this paper is to overview various definitions to deep learning and to show their limitations. Finally,...

OPENALEX DOI: https://doi.org/10.23919/wac.2018.8430387

Ship Detection With SAR C-Band Satellite Images: A Systematic Review

Cyprien Alexandre, Rodolphe Devillers, David Mouillot, Raphael Seguin et al. • IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing (2024)

Detecting and tracking ships remotely is now required in a wide range of contexts, from military security to illegal immigration control, as well as the management of fisheries and marine protected areas. Among the available methods, radar ...

DOAJ Open Access (DOAJ) DOI: 10.1109/JSTARS.2024.3437187

Development of an automated two pronuclei detection system on time‐lapse embryo images using deep learning techniques

Noritaka Fukunaga, Sho Sanami, Hiroya Kitasaka, Yuji Tsuzuki et al. • Reproductive Medicine and Biology (2020)

Abstract Purpose To establish an automated pronuclei determination system by analysis using deep learning technology which is able to effectively learn with limited amount of supervised data. Methods An algorithm was developed by explicitly...

DOAJ Open Access (DOAJ) DOI: 10.1002/rmb2.12331

Comparing deep learning and pathologist quantification of cell-level PD-L1 expression in non-small cell lung cancer whole-slide images

Leander van Eekelen, Joey Spronck, Monika Looijen-Salamon, Shoko Vos et al. • Scientific Reports (2024)

Abstract Programmed death-ligand 1 (PD-L1) expression is currently used in the clinic to assess eligibility for immune-checkpoint inhibitors via the tumor proportion score (TPS), but its efficacy is limited by high interobserver variability...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41598-024-57067-1

Deep Learning in Cardiology

Paschalis Bizopoulos, Dimitris Koutsouris • IEEE Reviews in Biomedical Engineering (2018)

The medical field is creating large amount of data that physicians are unable to decipher and use efficiently. Moreover, rule-based expert systems are inefficient in solving complicated medical tasks or for creating insights using big data....

OPENALEX Open Access DOI: https://doi.org/10.1109/rbme.2018.2885714

Deep Learning in Drug Discovery

Erik Gawehn, Jan A. Hiss, Gisbert Schneider • Molecular Informatics (2015)

Artificial neural networks had their first heyday in molecular informatics and drug discovery approximately two decades ago. Currently, we are witnessing renewed interest in adapting advanced neural network architectures for pharmaceutical ...

OPENALEX DOI: https://doi.org/10.1002/minf.201501008

IoT-RiceMobileNet: An improved lightweight MobileNetV2 Model for real-time multi-class rice disease detection using IoT.

Khawja Imran Masud, Md Yasin Zihad, Mehedi Hasan Shuvo, Mst Raonik Jannat et al. • PLoS ONE (2026)

Early and real-time detection of rice leaf diseases (RLD) poses a significant challenge for farmers, especially in rural regions with limited access to advanced technology. Conventional deep learning models often require substantial computa...

DOAJ Open Access (DOAJ) DOI: 10.1371/journal.pone.0356383

Overview of deep learning

Xuedan Du, Yinghao Cai, Shuo Wang, Leijie Zhang • Youth Academic Annual Conference of Chinese Association of Automation (YAC) (2016)

In recent years, deep learning has achieved great success in many fields, such as computer vision and natural language processing. Compared to traditional machine learning methods, deep learning has a strong learning ability and can make be...

OPENALEX DOI: https://doi.org/10.1109/yac.2016.7804882

Applications of Deep Learning in Biomedicine

Polina Mamoshina, Armando S. Vieira, Eugene Lane, Alex A. Zhavoronkov • Molecular Pharmaceutics (2016)

Increases in throughput and installed base of biomedical research equipment led to a massive accumulation of -omics data known to be highly variable, high-dimensional, and sourced from multiple often incompatible data platforms. While this ...

OPENALEX DOI: https://doi.org/10.1021/acs.molpharmaceut.5b00982

Survey on deep learning with class imbalance

Justin M. Johnson, Taghi M. Khoshgoftaar • Journal Of Big Data (2019)

The purpose of this study is to examine existing deep learning techniques for addressing class imbalanced data. Effective classification with imbalanced data is an important area of research, as high class imbalance is naturally inherent in...

OPENALEX cc-by DOI: https://doi.org/10.1186/s40537-019-0192-5

The Computational Limits of Deep Learning

Neil Thompson, Kristjan H. Greenewald, Keeheon Lee, Gabriel F. Manso (2023)

Deep learning's recent history has been one of achievement: from triumphing over humans in the game of Go to world-leading performance in image classification, voice recognition, translation, and other tasks.But this progress has come with ...

OPENALEX cc-by DOI: https://doi.org/10.21428/bf6fb269.1f033948

Deep Learning: A Primer for Radiologists

Gabriel Chartrand, Phillip M. Cheng, Eugene Vorontsov, Michal Drozdzal et al. • Radiographics (2017)

Deep learning is a class of machine learning methods that are gaining success and attracting interest in many domains, including computer vision, speech recognition, natural language processing, and playing games. Deep learning methods prod...

OPENALEX DOI: https://doi.org/10.1148/rg.2017170077

Fast iterative reconstruction for photoacoustic tomography using learned physical model: Theoretical validation

Ko-Tsung Hsu, Steven Guan, Parag V. Chitnis • Photoacoustics (2023)

Iterative reconstruction has demonstrated superior performance in medical imaging under compressed, sparse, and limited-view sensing scenarios. However, iterative reconstruction algorithms are slow to converge and rely heavily on hand-craft...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.pacs.2023.100452

Deep learning for computational biology

Christof Angermueller, Tanel Pärnamaa, Leopold Parts, Oliver Stegle • Molecular Systems Biology (2016)

Technological advances in genomics and imaging have led to an explosion of molecular and cellular profiling data from large numbers of samples. This rapid increase in biological data dimension and acquisition rate is challenging conventiona...

OPENALEX other-oa DOI: https://doi.org/10.15252/msb.20156651 PMC: 4965871

Introducing Deep Learning Self-Adaptive Misuse Network Intrusion Detection Systems

Dimitrios Papamartzivanos, Felix Gomez Marmol, Georgios Kambourakis • IEEE Access (2019)

The intrusion detection systems (IDSs) are essential elements when it comes to the protection of an ICT infrastructure. A misuse IDS is a stable method that can achieve high attack detection rates (ADR) while keeping false alarm rates under...

DOAJ Open Access (DOAJ) DOI: 10.1109/ACCESS.2019.2893871

Machine Learning in Nutrition Research

Daniel Kirk, E.J. Kok, Michele Tufano, Bedir Teki̇nerdoğan et al. • Advances in Nutrition (2022)

Data currently generated in the field of nutrition are becoming increasingly complex and high-dimensional, bringing with them new methods of data analysis. The characteristics of machine learning (ML) make it suitable for such analysis and ...

OPENALEX cc-by-nc DOI: https://doi.org/10.1093/advances/nmac103 PMC: 9776646

Machine learning and data-driven prediction of pore pressure from geophysical logs: A case study for the Mangahewa gas field, New Zealand

Ahmed E. Radwan, David A. Wood, Ahmed A. Radwan • Journal of Rock Mechanics and Geotechnical Engineering (2022)

Pore pressure is an essential parameter for establishing reservoir conditions, geological interpretation and drilling programs. Pore pressure prediction depends on information from various geophysical logs, seismic, and direct down-hole pre...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.jrmge.2022.01.012