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Receptor allostery promotes context-specific Sonic Hedgehog signaling during embryonic development

Miriam E. Dillard, Christina A. Daly, Rojalin Pradhan, Shariq S. Ansari et al. • Nature Communications (2026)

Abstract Sonic Hedgehog (SHH) signaling functions in temporal- and context-dependent manners to pattern diverse tissues during embryogenesis. The signal transducer Smoothened (SMO) is induced by sterols, oxysterols, and arachidonic acid (AA...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41467-026-75918-5

Transcriptome and DNA Methylome Analysis in a Mouse Model of Diet-Induced Obesity Predicts Increased Risk of Colorectal Cancer

Ruifang Li, Sara A. Grimm, Deepak Mav, Haiwei Gu et al. • Cell Reports (2018)

Colorectal cancer (CRC) tends to occur at older age; however, CRC incidence rates have been rising sharply among young age groups. The increasing prevalence of obesity is recognized as a major risk, yet the mechanistic underpinnings remain ...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.celrep.2017.12.071

Neudesin is involved in anxiety behavior: structural and neurochemical correlates

Ashley eNovais, Ashley eNovais, Ana Catarina Ferreira, Ana Catarina Ferreira et al. • Frontiers in Behavioral Neuroscience (2013)

Neudesin (also known as neuron derived neurotrophic factor, Nenf) is a scarcely studied putative non-canonical neurotrophic factor. In order to understand its function in the brain, we performed an extensive behavioral characterization (mot...

DOAJ Open Access (DOAJ) DOI: 10.3389/fnbeh.2013.00119

PRIMUS: Comprehensive proteomics of mouse intervertebral discs that inform novel biology and relevance to human disease modelling

Mateusz Kudelko, Peikai Chen, Vivian Tam, Ying Zhang et al. • Matrix Biology Plus (2021)

Mice are commonly used to study intervertebral disc (IVD) biology and related diseases such as IVD degeneration. Discs from both the lumbar and tail regions are used. However, little is known about compartmental characteristics in the diffe...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.mbplus.2021.100082

Linkage disequilibrium in wild mice.

Cathy C Laurie, Deborah A Nickerson, Amy D Anderson, Bruce S Weir et al. • PLoS Genetics (2007)

Crosses between laboratory strains of mice provide a powerful way of detecting quantitative trait loci for complex traits related to human disease. Hundreds of these loci have been detected, but only a small number of the underlying causati...

DOAJ Open Access (DOAJ) DOI: 10.1371/journal.pgen.0030144

Human RP105 monoclonal antibody enhances antigen-specific antibody production in unique culture conditions

Tatsuya Yamazaki, Kenta Iwasaki, Susumu Tomono, Masaki Imai et al. • iScience (2024)

Summary: Detecting antibodies, particularly those targeting donor human leukocyte antigens in organ transplantation and self-antigens in autoimmune diseases, is crucial for diagnosis and therapy. Radioprotective 105 (RP105), a Toll-like rec...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.isci.2024.110649

Anesthetic Oxygen Use and Sex Are Critical Factors in the FLASH Sparing Effect

Armin D. Tavakkoli, BA, Megan A. Clark, BE, Alireza Kheirollah, PhD, Austin M. Sloop, MS et al. • Advances in Radiation Oncology (2024)

Purpose: Ultra High Dose-Rate (UHDR) radiation has been reported to spare normal tissue, compared with Conventional Dose-Rate (CDR) radiation. However, important work remains to be done to improve the reproducibility of the FLASH effect. A ...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.adro.2024.101492

Efficacy and safety of biofilm dispersal by glycoside hydrolases in wounds

Whitni K. Redman, Garrett S. Welch, Avery C. Williams, Addyson J. Damron et al. • Biofilm (2021)

Novel anti-biofilm and dispersal agents are currently being investigated in an attempt to combat biofilm-associated wound infections. Glycoside hydrolases (GHs) are enzymes that hydrolyze the glycosidic bonds between sugars, such as those f...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.bioflm.2021.100061

Single Eye mRNA-Seq Reveals Normalisation of the Retinal Microglial Transcriptome Following Acute Inflammation

Oliver H. Bell, David A. Copland, Amy Ward, Lindsay B. Nicholson et al. • Frontiers in Immunology (2020)

Background: Whether retinal microglia can maintain or restore immune homeostasis during and after inflammation is unclear. We performed single-eye mRNA-sequencing on microglia at different timepoints following a single inflammatory stimulus...

DOAJ Open Access (DOAJ) DOI: 10.3389/fimmu.2019.03033

Loss of PRSS56 function leads to ocular angle defects and increased susceptibility to high intraocular pressure

Cassandre Labelle-Dumais, Goutham Pyatla, Seyyedhassan Paylakhi, Nicholas G. Tolman et al. • Disease Models & Mechanisms (2020)

Glaucoma is a leading cause of blindness, affecting up to 70 million people worldwide. High intraocular pressure (IOP) is a major risk factor for glaucoma. It is well established that inefficient aqueous humor (AqH) outflow resulting from s...

DOAJ Open Access (DOAJ) DOI: 10.1242/dmm.042853

Documenting Computer Vision Datasets

Milagros Miceli, Tianling Yang, Laurens Naudts, Martin Schuessler et al. • ACM Conference on Fairness, Accountability, and Transparency (FAccT) (2021)

In industrial computer vision, discretionary decisions surrounding the production of image training data remain widely undocumented. Recent research taking issue with such opacity has proposed standardized processes for dataset documentatio...

OPENALEX cc-by DOI: https://doi.org/10.1145/3442188.3445880

Humanized substitutions of Vmat1 in mice alter amygdala-dependent behaviors associated with the evolution of anxiety

Daiki X. Sato, Yukiko U. Inoue, Nahoko Kuga, Satoko Hattori et al. • iScience (2022)

Summary: The human vesicular monoamine transporter 1 (VMAT1) harbors unique substitutions (Asn136Thr/Ile) that affect monoamine uptake into synaptic vesicles. These substitutions are absent in all known mammals, suggesting their contributio...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.isci.2022.104800