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Showing 20 of 1,342 academic articles

Performance of computational algorithms to deconvolve heterogeneous bulk ovarian tumor tissue depends on experimental factors

Ariel A. Hippen, Dalia K. Omran, Lukas M. Weber, Euihye Jung et al. • Genome Biology (2023)

Abstract Background Single-cell gene expression profiling provides unique opportunities to understand tumor heterogeneity and the tumor microenvironment. Because of cost and feasibility, profiling bulk tumors remains the primary population-...

DOAJ Open Access (DOAJ) DOI: 10.1186/s13059-023-03077-7

Understanding tinnitus symptom dynamics and clinical improvement through intensive longitudinal data

Milena Engelke, Jorge Piano Simões, Laura Basso, Nina Wunder et al. • npj Digital Medicine (2025)

Abstract Intensive longitudinal sampling enhances subjective data collection by capturing real-time, dynamic inputs in natural settings, complementing traditional methods. This study evaluates the feasibility of using daily self-reported ap...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41746-024-01425-w

Association of androgen receptor and tumour-infiltrating lymphocytes with bone recurrence in triple-negative breast cancer

Petra Ilenič, Ajda Herman, Erik Langerholc, Barbara Gazić et al. • Journal of Bone Oncology (2024)

Background: As compared to endocrine responsive breast cancer bone is less frequent site of distant recurrence in triple-negative breast cancer (TNBC). A biomarker which predicts bone recurrence would allow a more personalized treatment app...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.jbo.2023.100518

Metabolic Flexibility to Predict Lifestyle Interventions Outcomes (MEPHISTO): Protocol for Predictive Validation Study and Randomized Controlled Trial

Monika Ludlova, Kateřina Koudelková, Jitka Pallova, Barbora Koudelkova et al. • JMIR Research Protocols (2025)

BackgroundWeight loss is a cornerstone of obesity treatment and diabetes mellitus type 2 (T2D) prevention, but its implementation in clinical practice is limited by its perceived burden and variability in response. Personalizing interventio...

DOAJ Open Access (DOAJ) DOI: 10.2196/67570

Longitudinal analysis of white matter and cortical lesions in multiple sclerosis

Mário João Fartaria, Tobias Kober, Cristina Granziera, Meritxell Bach Cuadra • NeuroImage: Clinical (2019)

Purpose: The goals of this study were to assess the performance of a novel lesion segmentation tool for longitudinal analyses, as well as to validate the generated lesion progression map between two time points using conventional and non-co...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.nicl.2019.101938

A method for automatically extracting infectious disease-related primers and probes from the literature

Pérez-Rey David, de la Iglesia Diana, de la Calle Guillermo, López-Campos Guillermo et al. • BMC Bioinformatics (2010)

Abstract Background Primer and probe sequences are the main components of nucleic acid-based detection systems. Biologists use primers and probes for different tasks, some related to the diagnosis and prescription of infectious diseases. Th...

DOAJ Open Access (DOAJ) DOI: 10.1186/1471-2105-11-410

An Integrated Approach for Designing and Analyzing Lumbar Vertebral Biomodels with Artificial Disc Replacement

Mhd Ayham Darwich, Katreen Ebrahem, Maysaa Shash, Hasan Mhd Nazha et al. • Applied Mechanics (2023)

This study aims to develop an integrated approach for 3D lumbar vertebral biomodel design and analysis, specifically targeting unilevel disc degeneration and the replacement of lumbar artificial discs. Key objectives include improving exist...

DOAJ Open Access (DOAJ) DOI: 10.3390/applmech4040063

Identification of brain regions predicting epileptogenesis by serial [18F]GE-180 positron emission tomography imaging of neuroinflammation in a rat model of temporal lobe epilepsy

Vera Russmann, Matthias Brendel, Erik Mille, Angela Helm-Vicidomini et al. • NeuroImage: Clinical (2017)

Excessive activation of inflammatory signaling pathways seems to be a hallmark of epileptogenesis. Positron emission tomography (PET) allows in vivo detection of brain inflammation with spatial information and opportunities for longitudinal...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.nicl.2017.04.003

Oxygen nanobubbles of ICG dimers achieve self-cascade photothermal and photodynamic therapy for hypoxia-reversible tumor treatment

Xiang Sun, Zheng Zhang, Moran Wang, Yuqin Chen et al. • Nano Research (2025)

Simultaneous photothermal and photodynamic therapies (PTT and PDT) hold great promise for noninvasive tumor therapy. However, effective regulation of PTT and PDT with optimal synergistic effects remains a challenge. To date, there are only ...

DOAJ Open Access (DOAJ) DOI: 10.26599/NR.2025.94907281

Medical informaticsʼ promised land

Mark E. Frisse • Academic Medicine (1999)

A decade ago, a "promised land" was envisioned in which the true potential of medical informatics would be realized. A decade later, it is time to assess academic medicine's progress in its journey into this medical informatics promised lan...

OPENALEX DOI: https://doi.org/10.1097/00001888-199912000-00010

Early Retinal Microvascular Alterations in Young Type 1 Diabetic Patients without Clinical Retinopathy

Alexandra Oltea Dan, Alin Ștefănescu-Dima, Andrei Teodor Bălășoiu, Ileana Puiu et al. • Diagnostics (2023)

The purpose of this study is to identify and quantify preclinical changes with the help of optical coherence tomography angiography (OCTA) within the retinal microcirculation of young type 1 diabetes (T1D) patients without clinical signs of...

DOAJ Open Access (DOAJ) DOI: 10.3390/diagnostics13091648

From Connectivity to Controllability: Unraveling the Brain Biomarkers of Major Depressive Disorder

Chunyu Pan, Ying Ma, Lifei Wang, Yan Zhang et al. • Brain Sciences (2024)

Major Depressive Disorder (MDD) is a significant neurological condition associated with aberrations in brain functional networks. Traditional studies have predominantly analyzed these from a network topology perspective. However, given the ...

DOAJ Open Access (DOAJ) DOI: 10.3390/brainsci14050509

A genome-wide association study on meat consumption in a Japanese population: the Japan Multi-Institutional Collaborative Cohort study

Yasuyuki Nakamura, Akira Narita, Yoichi Sutoh, Nahomi Imaeda et al. • Journal of Nutritional Science (2021)

Recent genome-wide association studies (GWAS) on the dietary habits of the Japanese population have shown that an effect rs671 allele was inversely associated with fish consumption, whereas it was directly associated with coffee consumption...

DOAJ Open Access (DOAJ) DOI: 10.1017/jns.2021.49