Reset
Showing 20 of 748 academic articles

Contribution of model organism phenotypes to the computational identification of human disease genes

Sarah M. Alghamdi, Paul N. Schofield, Robert Hoehndorf • Disease Models & Mechanisms (2022)

Computing phenotypic similarity helps identify new disease genes and diagnose rare diseases. Genotype–phenotype data from orthologous genes in model organisms can compensate for lack of human data and increase genome coverage. In the past d...

DOAJ Open Access (DOAJ) DOI: 10.1242/dmm.049441

Generative-Adversarial-Network-Based Image Reconstruction for the Capacitively Coupled Electrical Impedance Tomography of Stroke

Mikhail Ivanenko, Damian Wanta, Waldemar T. Smolik, Przemysław Wróblewski et al. • Life (2024)

This study investigated the potential of machine-learning-based stroke image reconstruction in capacitively coupled electrical impedance tomography. The quality of brain images reconstructed using the adversarial neural network (cGAN) was e...

DOAJ Open Access (DOAJ) DOI: 10.3390/life14030419

A State-of-the-Art Review on Machine Learning-based Methods for Prostate Cancer Diagnosis

Ari Mohammed ali Ahmed, Aree Ali Mohammed, Professor • UHD Journal of Science and Technology (2021)

Prostate cancer can be viewed as the second most dangerous and diagnosed cancer of men all over the world. In the past decade, machine and deep learning methods play a significant role in improving the accuracy of classification for both bi...

DOAJ Open Access (DOAJ) DOI: https://doi.org/10.21928/uhdjst.v5n2y2021.pp41-47

Automated cell type annotation and exploration of single-cell signaling dynamics using mass cytometry

Dimitrios Kleftogiannnis, Sonia Gavasso, Benedicte Sjo Tislevoll, Nisha van der Meer et al. • iScience (2024)

Summary: Mass cytometry by time-of-flight (CyTOF) is an emerging technology allowing for in-depth characterization of cellular heterogeneity in cancer and other diseases. Unfortunately, high-dimensional analyses of CyTOF data remain quite d...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.isci.2024.110261

Identification of immune-associated biomarkers of diabetes nephropathy tubulointerstitial injury based on machine learning: a bioinformatics multi-chip integrated analysis

Lin Wang, Jiaming Su, Zhongjie Liu, Shaowei Ding et al. • BioData Mining (2024)

Abstract Background Diabetic nephropathy (DN) is a major microvascular complication of diabetes and has become the leading cause of end-stage renal disease worldwide. A considerable number of DN patients have experienced irreversible end-st...

DOAJ Open Access (DOAJ) DOI: 10.1186/s13040-024-00369-x

Attention-based functional-group coarse-graining: a deep learning framework for molecular prediction and design

Ming Han, Ge Sun, Paul F. Nealey, Juan J. de Pablo • npj Computational Materials (2025)

Abstract Machine learning (ML) offers considerable promise for the design of new molecules and materials. In real-world applications, the design problem is often domain-specific, and suffers from insufficient data, particularly labeled data...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41524-025-01836-7

Satellite Retrieval of Air Pollution Changes in Central and Eastern China during COVID-19 Lockdown Based on a Machine Learning Model

Zigeng Song, Yan Bai, Difeng Wang, Teng Li et al. • Remote Sensing (2021)

With the implementation of the 2018–2020 Clean Air Action Plan (CAAP) the and impact from COVID-19 lockdowns in 2020, air pollution emissions in central and eastern China have decreased markedly. Here, by combining satellite remote sensing,...

DOAJ Open Access (DOAJ) DOI: 10.3390/rs13132525

Perceptual-Preference-Based Touring Routes in Xishu Gardens Using Panoramic Digital-Twin Modeling

Xueqian Gong, Zhanyuan Zhu, Li Guo, Yong Zhong et al. • Land (2025)

Xishu Gardens, an exemplary narrative of classical Chinese gardens, faces challenges in preserving its commemorative spatial structures while accommodating modern visitors’ needs. While trajectory analysis is critical, existing studies stru...

DOAJ Open Access (DOAJ) DOI: 10.3390/land14050932

Interpretable machine learning for predicting compression index of clays using SHAP and gradient boosting models

Khaled Hamdaoui, Ali Benzaamia, Billal Sari Ahmed, Mohamed Elhebib Guellil et al. • Journal of Engineering and Applied Science (2025)

Abstract This study introduces a novel, interpretable machine learning framework for predicting the compression index (Cc) of clay soils by integrating three advanced gradient boosting algorithms—XGBoost, CatBoost, and LightGBM—with SHapley...

DOAJ Open Access (DOAJ) DOI: 10.1186/s44147-025-00727-4

A review of machine learning in obesity

K. W. DeGregory, Patrick K. Kuiper, Thomas DeSilvio, James D. Pleuss et al. • Obesity Reviews (2018)

Rich sources of obesity-related data arising from sensors, smartphone apps, electronic medical health records and insurance data can bring new insights for understanding, preventing and treating obesity. For such large datasets, machine lea...

OPENALEX Open Access DOI: https://doi.org/10.1111/obr.12667 PMC: 8176949

Introduction to machine learning: k-nearest neighbors

Zhongheng Zhang • Annals of Translational Medicine (2016)

Machine learning techniques have been widely used in many scientific fields, but its use in medical literature is limited partly because of technical difficulties. k-nearest neighbors (kNN) is a simple method of machine learning. The articl...

OPENALEX cc-by-nc-nd DOI: https://doi.org/10.21037/atm.2016.03.37 PMC: 4916348

Development of Machine Learning Models to Predict Compressed Sward Height in Walloon Pastures Based on Sentinel-1, Sentinel-2 and Meteorological Data Using Multiple Data Transformations

Charles Nickmilder, Anthony Tedde, Isabelle Dufrasne, Françoise Lessire et al. • Remote Sensing (2021)

Accurate information about the available standing biomass on pastures is critical for the adequate management of grazing and its promotion to farmers. In this paper, machine learning models are developed to predict available biomass express...

DOAJ Open Access (DOAJ) DOI: 10.3390/rs13030408

Development and web-based implementation of a machine learning model for predicting one-year adverse outcomes in acute ischaemic stroke

ChunYu Meng, FeiFei Zuo, Shuai Liu, YuLiang Ji et al. • Frontiers in Medicine (2026)

BackgroundThis study aimed to develop an interpretable and clinically applicable machine learning prediction model to assess the risk of adverse outcomes within one year following acute ischaemic stroke, and to establish a corresponding web...

DOAJ Open Access (DOAJ) DOI: 10.3389/fmed.2026.1956859

Stacking Ensemble Approach for Churn Prediction: Integrating CNN and Machine Learning Models with CatBoost Meta-Learner

Tan Yan Lin, Pang Ying Han, Ooi Shih Yin, Khoh Wee How et al. • Journal of Engineering Technology and Applied Physics (2023)

In the telecom industry, predicting customer churn is crucial for improving customer retention. In literature, the use of single classifiers is predominantly focused. Customer data is complex data due to class imbalance and contain multiple...

DOAJ Open Access (DOAJ) DOI: 10.33093/jetap.2023.5.2.12

MATCHA, a novel regional hydroclimate-chemical reanalysis: System description and evaluation

C. Roychoudhury, R. Kumar, C. He, W. Y. Y. Cheng et al. • Earth System Science Data (2026)

We present MATCHA (Model for Atmospheric Transport and Chemistry in Asia), a 17-year (2003–2019) regional hydroclimate-chemical reanalysis for Asia (58–140° E, 4– 40° N) at 12 km resolution. MATCHA couples the Weather Research and Forecasti...

DOAJ Open Access (DOAJ) DOI: 10.5194/essd-18-5209-2026

Development of a Transfer Learning Technique for Rapid Adaptation of Thermal Compensation Models to Long-Term Machine Thermal Behavior Changes

Chia-Chin Chuang, Zheng-Wei Lin Chi, Tzu-Chien Kuo, Che-Jui Chang et al. • Machines (2026)

Structural aging and environmental changes associated with long-term operation can substantially modify the thermal behavior of machine tools, diminishing the accuracy of existing thermal compensation models. Traditional neural network appr...

DOAJ Open Access (DOAJ) DOI: 10.3390/machines14030309

A novel machine learning-based model for predicting the transition fatigue lifetime in piston aluminum alloys

Mahmood Matin, Mohammad Azadi • International Journal of Lightweight Materials and Manufacture (2024)

The estimation of transition fatigue lifetimes for piston aluminum alloys was carried out using unsupervised machine learning (ML) with the K-means algorithm. For this purpose, an experimental dataset representing standard ISO specimens wit...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.ijlmm.2024.04.004