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Showing 20 of 494 academic articles

Rapid identification of bloodstream infection pathogens and drug resistance using Raman spectroscopy enhanced by convolutional neural networks

Haiquan Kang, Haiquan Kang, Ziling Wang, Jingfang Sun et al. • Frontiers in Microbiology (2024)

Bloodstream infections (BSIs) are a critical medical concern, characterized by elevated morbidity, mortality, extended hospital stays, substantial healthcare costs, and diagnostic challenges. The clinical outcomes for patients with BSI can ...

DOAJ Open Access (DOAJ) DOI: 10.3389/fmicb.2024.1428304

Deep learning for neuroimaging: a validation study

Sergey Plis, Devon Hjelm, Ruslan Salakhutdinov, Elena A. Allen et al. • Frontiers in Neuroscience (2014)

Deep learning methods have recently made notable advances in the tasks of classification and representation learning. These tasks are important for brain imaging and neuroscience discovery, making the methods attractive for porting to a neu...

OPENALEX cc-by DOI: https://doi.org/10.3389/fnins.2014.00229 PMC: 4138493

Deep Learning in Ultrasound Imaging

Ruud J. G. van Sloun, Regev Cohen, Yonina C. Eldar • Proceedings of the IEEE (2019)

In this article, we consider deep learning strategies in ultrasound systems, from the front end to advanced applications. Our goal is to provide the reader with a broad understanding of the possible impact of deep learning methodologies on ...

OPENALEX Open Access DOI: https://doi.org/10.1109/jproc.2019.2932116

A novel network-level fused deep learning architecture with shallow neural network classifier for gastrointestinal cancer classification from wireless capsule endoscopy images

Muhammad Attique Khan, Usama Shafiq, Ameer Hamza, Anwar M. Mirza et al. • BMC Medical Informatics and Decision Making (2025)

Abstract Deep learning has significantly contributed to medical imaging and computer-aided diagnosis (CAD), providing accurate disease classification and diagnosis. However, challenges such as inter- and intra-class similarities, class imba...

DOAJ Open Access (DOAJ) DOI: 10.1186/s12911-025-02966-0

Deep Learning in Cardiology

Paschalis Bizopoulos, Dimitris Koutsouris • IEEE Reviews in Biomedical Engineering (2018)

The medical field is creating large amount of data that physicians are unable to decipher and use efficiently. Moreover, rule-based expert systems are inefficient in solving complicated medical tasks or for creating insights using big data....

OPENALEX Open Access DOI: https://doi.org/10.1109/rbme.2018.2885714

A deep learning model for the localization and extraction of brain tumors from MR images using YOLOv7 and grab cut algorithm

Srigiri Krishnapriya, Yepuganti Karuna • Frontiers in Oncology (2024)

IntroductionBrain tumors are a common disease that affects millions of people worldwide. Considering the severity of brain tumors (BT), it is important to diagnose the disease in its early stages. With advancements in the diagnostic process...

DOAJ Open Access (DOAJ) DOI: 10.3389/fonc.2024.1347363

Deep learning-based MRI model for predicting P53-mutated hepatocellular carcinoma

Lulu Jia, Qing Yang, Hanchen Jiang, Gang Huang et al. • BMC Medical Imaging (2025)

Abstract Background The P53-mutated Hepatocellular Carcinoma (HCC) is an aggressive variant associated with vascular endothelial growth factor (VEGF) overexpression and increased microvascular density. This study aimed to develop an MRI-bas...

DOAJ Open Access (DOAJ) DOI: 10.1186/s12880-025-02045-w

Deep Learning in Medical Image Analysis

Dinggang G. Shen, Guorong Wu A, Heung‐Il Suk • Annual Review of Biomedical Engineering (2017)

This review covers computer-assisted analysis of images in the field of medical imaging. Recent advances in machine learning, especially with regard to deep learning, are helping to identify, classify, and quantify patterns in medical image...

OPENALEX Open Access DOI: https://doi.org/10.1146/annurev-bioeng-071516-044442 PMC: 5479722

Deep Learning: A Primer for Radiologists

Gabriel Chartrand, Phillip M. Cheng, Eugene Vorontsov, Michal Drozdzal et al. • Radiographics (2017)

Deep learning is a class of machine learning methods that are gaining success and attracting interest in many domains, including computer vision, speech recognition, natural language processing, and playing games. Deep learning methods prod...

OPENALEX DOI: https://doi.org/10.1148/rg.2017170077

Fast iterative reconstruction for photoacoustic tomography using learned physical model: Theoretical validation

Ko-Tsung Hsu, Steven Guan, Parag V. Chitnis • Photoacoustics (2023)

Iterative reconstruction has demonstrated superior performance in medical imaging under compressed, sparse, and limited-view sensing scenarios. However, iterative reconstruction algorithms are slow to converge and rely heavily on hand-craft...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.pacs.2023.100452

Advancements in 7T magnetic resonance diffusion imaging: Technological innovations and applications in neuroimaging

Lisha Nie, Siyi Li, Bing Wu, Yuhui Xiong et al. • iRADIOLOGY (2024)

Abstract The development of 7‐Tesla (7T) magnetic resonance imaging systems has opened new avenues for exploring the advantages of diffusion imaging at higher field strengths, especially in neuroscience research. This review investigates wh...

DOAJ Open Access (DOAJ) DOI: 10.1002/ird3.92

Deep Learning in Neuroradiology

Greg Zaharchuk, Enhao Gong, Max Wintermark, Daniel L. Rubin et al. • American Journal of Neuroradiology (2018)

Deep learning is a form of machine learning using a convolutional neural network architecture that shows tremendous promise for imaging applications. It is increasingly being adapted from its original demonstration in computer vision applic...

OPENALEX cc-by DOI: https://doi.org/10.3174/ajnr.a5543 PMC: 7410723

Deep Learning for Health Informatics

Daniele Ravì, Charence Wong, Fani Deligianni, Melissa Berthelot et al. • IEEE Journal of Biomedical and Health Informatics (2016)

With a massive influx of multimodality data, the role of data analytics in health informatics has grown rapidly in the last decade. This has also prompted increasing interests in the generation of analytical, data driven models based on mac...

OPENALEX cc-by DOI: https://doi.org/10.1109/jbhi.2016.2636665

Deep learning for computational biology

Christof Angermueller, Tanel Pärnamaa, Leopold Parts, Oliver Stegle • Molecular Systems Biology (2016)

Technological advances in genomics and imaging have led to an explosion of molecular and cellular profiling data from large numbers of samples. This rapid increase in biological data dimension and acquisition rate is challenging conventiona...

OPENALEX other-oa DOI: https://doi.org/10.15252/msb.20156651 PMC: 4965871

Cauchy non-convex sparse feature selection method for the high-dimensional small-sample problem in motor imagery EEG decoding

Shaorong Zhang, Shaorong Zhang, Qihui Wang, Benxin Zhang et al. • Frontiers in Neuroscience (2023)

IntroductionThe time, frequency, and space information of electroencephalogram (EEG) signals is crucial for motor imagery decoding. However, these temporal-frequency-spatial features are high-dimensional small-sample data, which poses signi...

DOAJ Open Access (DOAJ) DOI: 10.3389/fnins.2023.1292724

Automated segmentation of brain metastases in T1-weighted contrast-enhanced MR images pre and post stereotactic radiosurgery

Hemalatha Kanakarajan, Wouter De Baene, Patrick Hanssens, Margriet Sitskoorn • BMC Medical Imaging (2025)

Abstract Background and purpose Accurate segmentation of brain metastases on Magnetic Resonance Imaging (MRI) is tedious and time-consuming for radiologists that could be optimized with deep learning (DL). Previous studies assessed several ...

DOAJ Open Access (DOAJ) DOI: 10.1186/s12880-025-01643-y

Deep learning in bioinformatics

Seonwoo Min, Byunghan Lee, Sungroh Yoon • Briefings in Bioinformatics (2016)

In the era of big data, transformation of biomedical big data into valuable knowledge has been one of the most important challenges in bioinformatics. Deep learning has advanced rapidly since the early 2000s and now demonstrates state-of-th...

OPENALEX Open Access DOI: https://doi.org/10.1093/bib/bbw068

Increased Atmospheric Aridity and Reduced Precipitation Drive the 2023 Extreme Wildfire Season in Canada

Gengke Lai, Yongguang Zhang • Geophysical Research Letters (2025)

Abstract Canada experienced an unprecedented wildfire season in 2023. Here, we analyzed the exceptional scale, dominant driving factors, and potential impacts on permafrost of these wildfires using Moderate Resolution Imaging Spectroradiome...

DOAJ Open Access (DOAJ) DOI: 10.1029/2024GL114492