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Automated Encoding of Clinical Documents Based on Natural Language Processing

Carol Friedman, Lyudmila Shagina, Yves A. Lussier, George M. Hripcsak • Journal of the American Medical Informatics Association (2004)

OBJECTIVE: The aim of this study was to develop a method based on natural language processing (NLP) that automatically maps an entire clinical document to codes with modifiers and to quantitatively evaluate the method. METHODS: An existing ...

OPENALEX Open Access DOI: https://doi.org/10.1197/jamia.m1552 PMC: 516246

Natural language processing: an introduction

Prakash M. Nadkarni, Lucila Ohno-machado A, Wendy W. Chapman • Journal of the American Medical Informatics Association (2011)

OBJECTIVES: To provide an overview and tutorial of natural language processing (NLP) and modern NLP-system design. TARGET AUDIENCE: This tutorial targets the medical informatics generalist who has limited acquaintance with the principles be...

OPENALEX Open Access DOI: https://doi.org/10.1136/amiajnl-2011-000464 PMC: 3168328

Soft–Hard Attention U-Net Model and Benchmark Dataset for Multiscale Image Shadow Removal

Eirini Cholopoulou, Dimitrios E. Diamantis, Dimitra-Christina C. Koutsiou, Dimitris K. Iakovidis • IEEE Access (2026)

Effective shadow removal is pivotal in enhancing visual image quality in applications such as computer vision and digital photography. During the last decades physics-based and machine learning methodologies have been proposed; however, mos...

DOAJ Open Access (DOAJ) DOI: 10.1109/ACCESS.2026.3728048

Predictive model for 5-year mortality after breast cancer surgery in Taiwan residents

Su-Hsin Huang, Joon-Khim Loh, Jinn-Tsong Tsai, Ming-Feng Houg et al. • Chinese Journal of Cancer (2017)

Abstract Background Few studies of breast cancer surgery outcomes have used longitudinal data for more than 2 years. This study aimed to validate the use of the artificial neural network (ANN) model to predict the 5-year mortality of breast...

DOAJ Open Access (DOAJ) DOI: 10.1186/s40880-017-0192-9

Multimodal artificial intelligence for subepithelial lesion classification and characterization: a multicenter comparative study (with video)

Jiao Li, Xiaojuan Jing, Qin Zhang, Xiaoxiang Wang et al. • BMC Medical Informatics and Decision Making (2025)

Abstract Background Subepithelial lesions (SELs) present significant diagnostic challenges in gastrointestinal endoscopy, particularly in differentiating malignant types, such as gastrointestinal stromal tumors (GISTs) and neuroendocrine tu...

DOAJ Open Access (DOAJ) DOI: 10.1186/s12911-025-03147-9

Feasibility and effectiveness of automatic deep learning network and radiomics models for differentiating tumor stroma ratio in pancreatic ductal adenocarcinoma

Hongfan Liao, Jiang Yuan, Chunhua Liu, Jiao Zhang et al. • Insights into Imaging (2023)

Abstract Objective This study aims to compare the feasibility and effectiveness of automatic deep learning network and radiomics models in differentiating low tumor stroma ratio (TSR) from high TSR in pancreatic ductal adenocarcinoma (PDAC)...

DOAJ Open Access (DOAJ) DOI: 10.1186/s13244-023-01553-z

Integrative multiomics-histopathology analysis for breast cancer classification

Yasha Ektefaie, William Yuan, Deborah A. Dillon, Nancy U. Lin et al. • npj Breast Cancer (2021)

Abstract Histopathologic evaluation of biopsy slides is a critical step in diagnosing and subtyping breast cancers. However, the connections between histology and multi-omics status have never been systematically explored or interpreted. We...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41523-021-00357-y

Deep learning applications and challenges in big data analytics

Maryam Mousaarab Najafabadi, Flavio Villanustre, Taghi M. Khoshgoftaar, Naeem Seliya et al. • Journal Of Big Data (2015)

Abstract Big Data Analytics and Deep Learning are two high-focus of data science. Big Data has become important as many organizations both public and private have been collecting massive amounts of domain-specific information, which can con...

OPENALEX cc-by DOI: https://doi.org/10.1186/s40537-014-0007-7

Rapid profiling of carcinogenic types of Helicobacter pylori infection via deep learning analysis of label-free SERS spectra of human serum

Fen Li, Yu-Ting Si, Jia-Wei Tang, Zeeshan Umar et al. • Computational and Structural Biotechnology Journal (2024)

WHO classified Helicobacter pylori as a Group I carcinogen for gastric cancer as early as 1994. However, despite the high prevalence of H. pylori infection, only about 3 % of infected individuals eventually develop gastric cancer, with the ...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.csbj.2024.09.008

Automated Lung Sound Classification Using a Hybrid CNN-LSTM Network and Focal Loss Function

Georgios Petmezas, Grigorios-Aris Cheimariotis, Leandros Stefanopoulos, Bruno Rocha et al. • Sensors (2022)

Respiratory diseases constitute one of the leading causes of death worldwide and directly affect the patient’s quality of life. Early diagnosis and patient monitoring, which conventionally include lung auscultation, are essential for the ef...

DOAJ Open Access (DOAJ) DOI: 10.3390/s22031232

A Survey on Deep Learning for Steering Angle Prediction in Autonomous Vehicles

Usman Manzo Gidado, Haruna Chiroma, Nahla Aljojo, Saidu Abubakar et al. • IEEE Access (2020)

Steering angle prediction is critical in the control of Autonomous Vehicles (AVs) and has attracted the attention of researchers, manufacturers, and insurance companies in the automotive industry. Different Deep Learning (DL) architectures ...

DOAJ Open Access (DOAJ) DOI: 10.1109/ACCESS.2020.3017883

A novel network-level fused deep learning architecture with shallow neural network classifier for gastrointestinal cancer classification from wireless capsule endoscopy images

Muhammad Attique Khan, Usama Shafiq, Ameer Hamza, Anwar M. Mirza et al. • BMC Medical Informatics and Decision Making (2025)

Abstract Deep learning has significantly contributed to medical imaging and computer-aided diagnosis (CAD), providing accurate disease classification and diagnosis. However, challenges such as inter- and intra-class similarities, class imba...

DOAJ Open Access (DOAJ) DOI: 10.1186/s12911-025-02966-0

Deep Learning for Health Informatics

Daniele Ravì, Charence Wong, Fani Deligianni, Melissa Berthelot et al. • IEEE Journal of Biomedical and Health Informatics (2016)

With a massive influx of multimodality data, the role of data analytics in health informatics has grown rapidly in the last decade. This has also prompted increasing interests in the generation of analytical, data driven models based on mac...

OPENALEX cc-by DOI: https://doi.org/10.1109/jbhi.2016.2636665