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Comparative Analysis of Tools and Approaches for Source Tracking Listeria monocytogenes in a Food Facility Using Whole-Genome Sequence Data

Balamurugan Jagadeesan, Leen Baert, Martin Wiedmann, Renato H. Orsi • Frontiers in Microbiology (2019)

As WGS is increasingly used by food industry to characterize pathogen isolates, users are challenged by the variety of analysis approaches available, ranging from methods that require extensive bioinformatics expertise to commercial softwar...

DOAJ Open Access (DOAJ) DOI: 10.3389/fmicb.2019.00947

Comprehensive analyses of m6A regulators and interactive coding and non-coding RNAs across 32 cancer types

Sipeng Shen, Ruyang Zhang, Yue Jiang, Yi Li et al. • Molecular Cancer (2021)

Abstract N6-Methyladenosine (m6A) is an RNA modification that interacts with numerous coding and non-coding RNAs and plays important roles in the development of cancers. Nonetheless, the clinical impacts of m6A interactive genes on these ca...

DOAJ Open Access (DOAJ) DOI: 10.1186/s12943-021-01362-2

Clustering of Unhealthy Lifestyle and the Risk of Adverse Events in Patients With Atrial Fibrillation

So-Ryoung Lee, Eue-Keun Choi, Eue-Keun Choi, Sang-Hyeon Park et al. • Frontiers in Cardiovascular Medicine (2022)

BackgroundLittle is known regarding the risk of clinical outcomes depending on the clustering of lifestyle behaviors after atrial fibrillation (AF) diagnosis. This study evaluated the association between a cluster of healthy lifestyle behav...

DOAJ Open Access (DOAJ) DOI: 10.3389/fcvm.2022.885016

Exploring the Relative Importance and Interactive Impacts of Explanatory Variables of the Built Environment on Ride-Hailing Ridership by Using the Optimal Parameter-Based Geographical Detector (OPGD) Model

Zhenbao Wang, Shuyue Liu, Yuchen Zhang, Xin Gong et al. • Applied Sciences (2023)

The impact of the built environment on the ridership of ride-hailing results depends on the spatial grid scale. The existing research on the demand model of ride-hailing ignores the modifiable areal unit problem (MAUP). Taking Chengdu as an...

DOAJ Open Access (DOAJ) DOI: 10.3390/app13042180

Children’s memory “in the wild”: examining the temporal organization of free recall from a week-long camp at a local zoo

Thanujeni Pathman, Lina Deker, Puneet Kaur Parmar, Mark Christopher Adkins et al. • Cognitive Research (2023)

Abstract Free-recall paradigms have greatly influenced our understanding of memory. The majority of this research involves laboratory-based events (e.g., word lists) that are studied and tested within minutes. This literature shows that adu...

DOAJ Open Access (DOAJ) DOI: 10.1186/s41235-022-00452-z

Foraminifera as environmental bioindicators on the Rio Grande Terrace: a preliminary assessment

João Machado Neto, Simone Souza Moraes, Edgar Romeo Herrera de Figueiredo Iza, Felipe Rocha Abreu et al. • Journal of the Geological Survey of Brazil (2025)

There is still a significant gap in research that integrates foraminiferal data with water mass characterization within the specific context of marine phosphorite prospecting. Therefore, this study investigates the environmental dynamics of...

DOAJ Open Access (DOAJ) DOI: 10.29396/jgsb.2026.v9.n2.6

Prediction of metabolic status of dairy cows in early lactation using milk fatty acids and test-day variables

Muluken Girma, A.T.M. van Knegsel, S. Heirbaut, L. Vandaele et al. • Journal of Dairy Science (2023)

ABSTRACT: Early lactation metabolic imbalance is an important physiological change affecting the health, production, and reproduction of dairy cows. The aims of this study were (1) to evaluate the potential of test-day (TD) variables with o...

DOAJ Open Access (DOAJ) DOI: 10.3168/jds.2022-22702

Identification and evaluation of the effective criteria for detection of congestion in a smart city

Anita Mohanty, Subrat Kumar Mohanty, Bhagyalaxmi Jena, Ambarish G. Mohapatra et al. • IET Communications (2022)

Abstract The delay in transportation of necessary items is due to traffic congestion throughout the world. This is a serious phenomenon which results in waste of time and fuel. The detection of road conditions and dissemination of traffic i...

DOAJ Open Access (DOAJ) DOI: 10.1049/cmu2.12344

Broad-Spectrum Antiviral Activity of an Ankyrin Repeat Protein on Viral Assembly against Chimeric NL4-3 Viruses Carrying Gag/PR Derived from Circulating Strains among Northern Thai Patients

Supachai Sakkhachornphop, Sudarat Hadpech, Tanchanok Wisitponchai, Chansunee Panto et al. • Viruses (2018)

Certain proteins have demonstrated proficient human immunodeficiency virus (HIV-1) life cycle disturbance. Recently, the ankyrin repeat protein targeting the HIV-1 capsid, AnkGAG1D4, showed a negative effect on the viral assembly of the HIV...

DOAJ Open Access (DOAJ) DOI: 10.3390/v10110625

Evolution of the tripartite symbiosis between earthworms, Verminephrobacter and Flexibacter-like bacteria

Peter eMøller, Marie Braad Lund, Andreas eSchramm • Frontiers in Microbiology (2015)

Nephridial (excretory organ) symbionts are widespread in lumbricid earthworms and the complexity of the nephridial symbiont communities varies greatly between earthworm species. The two most common symbionts are the well-described Vermineph...

DOAJ Open Access (DOAJ) DOI: 10.3389/fmicb.2015.00529

Botnet detection using graph-based feature clustering

Sudipta Chowdhury, Mojtaba Khanzadeh, Ravi Akula, Fangyan Zhang et al. • Journal of Big Data (2017)

Abstract Detecting botnets in a network is crucial because bots impact numerous areas such as cyber security, finance, health care, law enforcement, and more. Botnets are becoming more sophisticated and dangerous day-by-day, and most of the...

DOAJ Open Access (DOAJ) DOI: 10.1186/s40537-017-0074-7

Analysis of factors affecting the length of stay of patients using clustering and association rules (Case study: Amir al-Momenin Hospital, Maragheh)

Mahdi Yousefi Nejad, Karim Farajian, Hossein Jaleb • مدیریت مهندسی و رایانش نرم (2025)

One of the major indicators in evaluating the performance of hospitals and their managers is the average length of stay of patients; given the importance of this indicator, the present study has examined the factors affecting the length of ...

DOAJ Open Access (DOAJ) DOI: 10.22091/jemsc.2025.11174.1195

Time dynamics of symptom progression in patients with acute pancreatitis: a Dynamic Time Warping analysis

Rui Han, Xiaoyu Deng, Hebing Liu, Yujie Duan et al. • Frontiers in Medicine (2025)

BackgroundAcute pancreatitis (AP) morbidity has been increasing in recent years. Patients with AP exhibit highly variable symptom patterns over time, posting challenges to traditional analytical methods. Dynamic Time Warping (DTW) effective...

DOAJ Open Access (DOAJ) DOI: 10.3389/fmed.2025.1703268

Identification of Specific IgE Antibodies and Asthma Control Interaction and Association Using Cluster Analysis in a Bulgarian Asthmatic Children Cohort

Snezhina Lazova, Tsvetelina Velikova, Stamatios Priftis, Guergana Petrova • Antibodies (2020)

(1) Background: Asthma is a complex heterogeneous disease that likely comprises several distinct disease phenotypes, where the clustering approach has been used to classify the heterogeneous asthma population into distinct phenotypes; (2) M...

DOAJ Open Access (DOAJ) DOI: 10.3390/antib9030031

Mapping Intellectual Structure of Health Literacy Area Based on Co-Word Analysis in Web of Science Database during the Years 1993-2017

Fatemeh Baji, Fereydoun Azadeh, Parastoo Parsaei-Mohammadi, Shoukat Parmah • مدیریت اطلاعات سلامت (2018)

Introduction: Creating an image of the conceptual structure of health literacy area, as well as the study of interdisciplinary and the relationship between its domains seems necessary. The present study examined the intellectual structure o...

DOAJ Open Access (DOAJ) DOI: 10.22122/him.v15i3.3577

Examining Rural and Urban Sentiment Difference in COVID-19–Related Topics on Twitter: Word Embedding–Based Retrospective Study

Yongtai Liu, Zhijun Yin, Congning Ni, Chao Yan et al. • Journal of Medical Internet Research (2023)

BackgroundBy the end of 2022, more than 100 million people were infected with COVID-19 in the United States, and the cumulative death rate in rural areas (383.5/100,000) was much higher than in urban areas (280.1/100,000). As the pandemic s...

DOAJ Open Access (DOAJ) DOI: 10.2196/42985