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Applications of Deep Learning and Reinforcement Learning to Biological Data

Mufti Mahmud, M. Shamim Kaiser, Amir Hussain, Stefano Vassanelli • IEEE Transactions on Neural Networks and Learning Systems (2018)

Rapid advances in hardware-based technologies during the past decades have opened up new possibilities for life scientists to gather multimodal data in various application domains, such as omics, bioimaging, medical imaging, and (brain/body...

OPENALEX Open Access DOI: https://doi.org/10.1109/tnnls.2018.2790388

Deep Learning in Medical Ultrasound Analysis: A Review

Shengfeng Liu, Yi Wang, Xin Yang, Baiying Lei et al. • Engineering (2019)

Ultrasound (US) has become one of the most commonly performed imaging modalities in clinical practice. It is a rapidly evolving technology with certain advantages and with unique challenges that include low imaging quality and high variabil...

OPENALEX cc-by-nc-nd DOI: https://doi.org/10.1016/j.eng.2018.11.020

A Survey on Deep Learning for Human Mobility

Massimiliano Luca, Gianni Barlacchi, Bruno Lepri, Luca Pappalardo • ACM Computing Surveys (2021)

The study of human mobility is crucial due to its impact on several aspects of our society, such as disease spreading, urban planning, well-being, pollution, and more. The proliferation of digital mobility data, such as phone records, GPS t...

OPENALEX Open Access DOI: https://doi.org/10.1145/3485125

Machine and deep learning methods for radiomics

Michele Avanzo, Lise Wei, Joseph Stancanello, Martin Vallières et al. • Medical Physics (2020)

Radiomics is an emerging area in quantitative image analysis that aims to relate large-scale extracted imaging information to clinical and biological endpoints. The development of quantitative imaging methods along with machine learning has...

OPENALEX other-oa DOI: https://doi.org/10.1002/mp.13678 PMC: 8965689

Computational Linguistics and Deep Learning

Christopher D. Manning • Computational Linguistics (2015)

Deep Learning waves have lapped at the shores of computational linguistics for several years now, but 2015 seems like the year when the full force of the tsunami hit the major Natural Language Processing (NLP) conferences. However, some pun...

OPENALEX Open Access DOI: https://doi.org/10.1162/coli_a_00239

A Review of Deep Learning Research

Ruihui Mu, Xiaoqin Zeng • KSII Transactions on Internet and Information Systems (2019)

With the advent of big data, deep learning technology has become an important research direction in the field of machine learning, which has been widely applied in the image processing, natural language processing, speech recognition and on...

OPENALEX Open Access DOI: https://doi.org/10.3837/tiis.2019.04.001

Deep Learning for the Earth Sciences

Gustau Camps‐Valls, Devis Tuia, Xiao Xiang Zhu, Markus Reichstein • Wiley eBooks (2021)

Deep learning is a fundamental technique in modern Artificial Intelligence and is being applied to disciplines across the scientific spectrum; earth science is no exception. Yet, the link between deep learning and Earth sciences has only re...

OPENALEX Open Access DOI: https://doi.org/10.1002/9781119646181

DeepTox: Toxicity Prediction using Deep Learning

Andreas Mayr, Günter Klambauer, Thomas Unterthiner, Sepp Hochreiter • Frontiers in Environmental Science (2016)

The Tox21 Data Challenge has been the largest effort of the scientific community to compare computational methods for toxicity prediction. This challenge comprised 12,000 environmental chemicals and drugs which were measured for 12 differen...

OPENALEX cc-by DOI: https://doi.org/10.3389/fenvs.2015.00080

Time-series forecasting with deep learning: a survey

Bryan Y. Lim, Stefan Zohren • Philosophical Transactions of the Royal Society A Mathematical Physical and Engineering Sciences (2021)

Numerous deep learning architectures have been developed to accommodate the diversity of time-series datasets across different domains. In this article, we survey common encoder and decoder designs used in both one-step-ahead and multi-hori...

OPENALEX Open Access DOI: https://doi.org/10.1098/rsta.2020.0209

Deep Learning: A Review

Rocio Vargas, Amir Hosein Mosavi, Ramon Ruiz • Preprints.org (2018)

Deep learning is an emerging area of machine learning (ML) research. It comprises multiple hidden layers of artificial neural networks. The deep learn- ing methodology applies nonlinear transformations and model abstractions of high level i...

OPENALEX cc-by DOI: https://doi.org/10.20944/preprints201810.0218.v1

Deep Learning for Hyperspectral Image Classification: An Overview

Shutao Li A, Weiwei Song, Leyuan Fang, Yushi Chen et al. • IEEE Transactions on Geoscience and Remote Sensing (2019)

Hyperspectral image (HSI) classification has become a hot topic in the field of remote sensing. In general, the complex characteristics of hyperspectral data make the accurate classification of such data challenging for traditional machine ...

OPENALEX Open Access DOI: https://doi.org/10.1109/tgrs.2019.2907932

Deep Learning in Mobile and Wireless Networking: A Survey

Chaoyun Zhang, Paul Patras, Hamed Haddadi • IEEE Communications Surveys & Tutorials (2019)

The rapid uptake of mobile devices and the rising popularity of mobile applications and services pose unprecedented demands on mobile and wireless networking infrastructure. Upcoming 5G systems are evolving to support exploding mobile traff...

OPENALEX Open Access DOI: https://doi.org/10.1109/comst.2019.2904897

Deep Learning for Computer Vision: A Brief Review

Athanasios S. Voulodimos, Nikolaos D. Doulamis, Anastasios D. Doulamis, Eftychios E. Protopapadakis • Computational Intelligence and Neuroscience (2018)

Over the last years deep learning methods have been shown to outperform previous state-of-the-art machine learning techniques in several fields, with computer vision being one of the most prominent cases. This review paper provides a brief ...

OPENALEX cc-by DOI: https://doi.org/10.1155/2018/7068349 PMC: 5816885

Opportunities and obstacles for deep learning in biology and medicine

Travers H. Ching, Daniel Scott Himmelstein, Brett K. Beaulieu‐Jones, Alexandr A. Kalinin et al. • Journal of The Royal Society Interface (2018)

Deep learning describes a class of machine learning algorithms that are capable of combining raw inputs into layers of intermediate features. These algorithms have recently shown impressive results across a variety of domains. Biology and m...

OPENALEX cc-by DOI: https://doi.org/10.1098/rsif.2017.0387 PMC: 5938574

Application of Deep Learning in Food: A Review

Lei Zhou, Chu Zhang, Fei Liu, Zhengjun Qiu et al. • Comprehensive Reviews in Food Science and Food Safety (2019)

Deep learning has been proved to be an advanced technology for big data analysis with a large number of successful cases in image processing, speech recognition, object detection, and so on. Recently, it has also been introduced in food sci...

OPENALEX DOI: https://doi.org/10.1111/1541-4337.12492

Deep Learning in Ultrasound Imaging

Ruud J. G. van Sloun, Regev Cohen, Yonina C. Eldar • Proceedings of the IEEE (2019)

In this article, we consider deep learning strategies in ultrasound systems, from the front end to advanced applications. Our goal is to provide the reader with a broad understanding of the possible impact of deep learning methodologies on ...

OPENALEX Open Access DOI: https://doi.org/10.1109/jproc.2019.2932116

Deep learning in optical metrology: a review

Chao Zuo, Jiaming Qian, Shijie Feng, Wei Yin et al. • Light Science & Applications (2022)

With the advances in scientific foundations and technological implementations, optical metrology has become versatile problem-solving backbones in manufacturing, fundamental research, and engineering applications, such as quality control, n...

OPENALEX cc-by DOI: https://doi.org/10.1038/s41377-022-00714-x PMC: 8866517