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Classification of bioactive peptides: A systematic benchmark of models and encodings

Edoardo Bizzotto, Guido Zampieri, Laura Treu, Pasquale Filannino et al. • Computational and Structural Biotechnology Journal (2024)

Bioactive peptides are short amino acid chains possessing biological activity and exerting physiological effects relevant to human health. Despite their therapeutic value, their identification remains a major problem, as it mainly relies on...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.csbj.2024.05.040

Advancing Biosensors with Machine Learning

Feiyun Cui, Yun Yue, Yi Zhang, Ziming Zhang et al. • ACS Sensors (2020)

Chemometrics play a critical role in biosensors-based detection, analysis, and diagnosis. Nowadays, as a branch of artificial intelligence (AI), machine learning (ML) have achieved impressive advances. However, novel advanced ML methods, es...

OPENALEX DOI: https://doi.org/10.1021/acssensors.0c01424

Attractor reconstruction by machine learning

Zhixin Lu, Brian R. Hunt, Edward Ott • Chaos An Interdisciplinary Journal of Nonlinear Science (2018)

A machine-learning approach called "reservoir computing" has been used successfully for short-term prediction and attractor reconstruction of chaotic dynamical systems from time series data. We present a theoretical framework that describes...

OPENALEX Open Access DOI: https://doi.org/10.1063/1.5039508

Machine Learning in Python: Main Developments and Technology Trends in Data Science, Machine Learning, and Artificial Intelligence

Sebastian Raschka, Joshua M. Patterson, Corey Nolet • Information (2020)

Smarter applications are making better use of the insights gleaned from data, having an impact on every industry and research discipline. At the core of this revolution lies the tools and the methods that are driving it, from processing the...

OPENALEX cc-by DOI: https://doi.org/10.3390/info11040193

mlr: Machine Learning in R

Bernd Bischl, Michel Lang, Lars Kotthoff, Patrick Schratz et al. (2013)

Interface to a large number of classification and regression techniques, including machine-readable parameter descriptions. There is also an experimental extension for survival analysis, clustering and general, example-specific cost-sensiti...

OPENALEX Open Access DOI: https://doi.org/10.32614/cran.package.mlr

Machine Learning Mastery

Naga Ramesh Palakurti, Nageswararao Kanchepu • Advances in systems analysis, software engineering, and high performance computing book series (2024)

This chapter delves into the core principles of machine learning, offering practical insights for effective data processing. From foundational concepts to advanced techniques, the narrative unfolds as a comprehensive guide for harnessing th...

OPENALEX DOI: https://doi.org/10.4018/979-8-3693-2909-2.ch002

Explainable machine learning for predicting clinical outcomes in HIV/TB co-infection: a comparative retrospective study

Qingfeng Sun, Kai Zhang, Yuanlong Xu, Mengmei Luo et al. • BMC Infectious Diseases (2025)

Abstract Background HIV/TB co-infection presents substantial public-health challenges, showing greater treatment-failure and mortality rates than tuberculosis alone. Recent advances in machine learning (ML) provide a robust means of identif...

DOAJ Open Access (DOAJ) DOI: 10.1186/s12879-025-11998-w

Integrated Bioinformatics Analysis and Experimental Verification of Immune Cell Infiltration and the Related Core Genes in Ulcerative Colitis

Zhao D, Qin D, Yin L, Yang Q • Pharmacogenomics and Personalized Medicine (2023)

Danya Zhao,1 Danping Qin,2 Liming Yin,3 Qiang Yang4 1The First School of Clinical Medicine of Zhejiang Chinese Medical University, Hangzhou, People’s Republic of China; 2Department of Gastroenterology, The First Affiliated Hospital of Zheji...

DOAJ Open Access (DOAJ)

The association of Coronavirus Disease-19 mortality and prior bacille Calmette-Guerin vaccination: a robust ecological analysis using unsupervised machine learning

Nathan A. Brooks, Ankur Puri, Sanya Garg, Swapnika Nag et al. • Scientific Reports (2021)

Abstract Population-level data have suggested that bacille Calmette-Guerin (BCG) vaccination may lessen the severity of Coronavirus Disease-19 (COVID-19) prompting clinical trials in this area. Some reports have demonstrated conflicting res...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41598-020-80787-z

Machine learning for neuroimaging with scikit-learn

Alexandre Abraham, Fabián Pedregosa, Michael Eickenberg, Philippe Gervais et al. • Frontiers in Neuroinformatics (2014)

Statistical machine learning methods are increasingly used for neuroimaging data analysis. Their main virtue is their ability to model high-dimensional datasets, e.g., multivariate analysis of activation images or resting-state time series....

OPENALEX cc-by DOI: https://doi.org/10.3389/fninf.2014.00014 PMC: 3930868

Bayesian Reasoning and Machine Learning

David Barber • Cambridge University Press eBooks (2012)

Machine learning methods extract value from vast data sets quickly and with modest resources. They are established tools in a wide range of industrial applications, including search engines, DNA sequencing, stock market analysis, and robot ...

OPENALEX DOI: https://doi.org/10.1017/cbo9780511804779

Machine learning methods in chemoinformatics

John B. O. Mitchell • Wiley Interdisciplinary Reviews Computational Molecular Science (2014)

Machine learning algorithms are generally developed in computer science or adjacent disciplines and find their way into chemical modeling by a process of diffusion. Though particular machine learning methods are popular in chemoinformatics ...

OPENALEX cc-by DOI: https://doi.org/10.1002/wcms.1183 PMC: 4180928

Machine Learning and Law

Harry Surden • Colorado Law Scholarly Commons (University of Colorado Colorado Springs) (2014)

This Article explores the application of machine learning techniques within the practice of law. Broadly speaking “machine learning” refers to computer algorithms that have the ability to “learn” or improve in performance over time on some ...

OPENALEX Open Access

Hyperparameter Search in Machine Learning

Marc Claesen, Bart De Moor • arXiv (Cornell University) (2015)

We introduce the hyperparameter search problem in the field of machine learning and discuss its main challenges from an optimization perspective. Machine learning methods attempt to build models that capture some element of interest based o...

OPENALEX Open Access DOI: https://doi.org/10.48550/arxiv.1502.02127

Computer Vision-Based Assessment of Motor Functioning in Schizophrenia: Use of Smartphones for Remote Measurement of Schizophrenia Symptomatology

Anzar Abbas, Vijay Yadav, Emma Smith, Elizabeth Ramjas et al. • Digital Biomarkers (2021)

Introduction: Motor abnormalities have been shown to be a distinct component of schizophrenia symptomatology. However, objective and scalable methods for assessment of motor functioning in schizophrenia are lacking. Advancements in machine ...

DOAJ Open Access (DOAJ) DOI: 10.1159/000512383