Academic Articles & Research Papers

How cryptic animal vectors of fungi can influence forest health in a changing climate and how to anticipate them.

Korkmaz Y, Bełka M, Blumenstein K • Applied microbiology and biotechnology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13450-0 PMC: PMC11910412

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Improved Neisseria gonorrhoeae culture media without atmospheric CO(2).

Menkiti CJ, Snyder LAS • Applied microbiology and biotechnology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13449-7 PMC: PMC11928391

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Deciphering factors influencing planktonic and sedimentary microbial assembly processes in Midwest salinity lakes.

Hu J, Chen T, Lian CA, Wang L et al. • Applied microbiology and biotechnology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13498-y PMC: PMC12102102

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Colorectal cancer biofilm composition reveals distinct bacterial species signature.

Kushwaha M, Dalal N, Chaudhary S, Ahmed A et al. • Applied microbiology and biotechnology (2025)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13537-8 PMC: PMC12222442

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Characterization and genetic diversity of pseudomonads population from highbush blueberry in western Canada.

Latchman SR, Burlakoti RR, Novinscak A, Castellarin SD • Applied microbiology and biotechnology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13676-y PMC: PMC12795873

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Distinct oral and fecal microbiota composition in preschool children with overweight/obesity: a cross-sectional study.

Feng H, Zeng X, Yu S, Sun Q et al. • Applied microbiology and biotechnology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13685-x PMC: PMC12799744

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Characterization of the oral microbiome in the diverse South African population by PacBio HiFi sequencing.

Govender P, Cason E, Ghai M • Applied microbiology and biotechnology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13652-6 PMC: PMC12808187

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Production of uncommon carotenoids and lipids by red yeasts utilizing agri-food residues and waste cooking oil.

Donzella S, Romano D, Molinari F, Puga SB et al. • Applied microbiology and biotechnology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1007/s00253-025-13680-2 PMC: PMC12823764

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Weak but Repeated Patterns of Co-Introgression of Nuclear OXPHOS Genes and Mitochondrial DNA in Iberian Wall Lizards.

Laizé M, Marques JP, Geniez P, Mochales-Riaño G et al. • Genome biology and evolution (2026)

PMC PMC Public Access (View-Only) DOI: 10.1093/gbe/evag228 PMC: PMC13599021

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Grand challenge in microbiome data science: recovering the microbiome as a system.

Belenky P, Meyer F • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1970739 PMC: PMC13597785

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Integrated genomic analysis of Stenotrophomonas maltophilia: resistome, virulence-associated genes, predicted mobile genetic elements, and core-genome phylogeny.

Sun R, Liu Y, Cao X, Liu C et al. • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1880458 PMC: PMC13597948

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Precision phage therapy in the AI/ML era: a systematic review of discovery-to-clinical translation evidence.

Alharbi NM • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1873220 PMC: PMC13599804

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Fastidious or rarely isolated gram-negative rods with a particular focus on Kingella kingae.

Zbinden R, Yagupsky P • Clinical microbiology reviews (2025)

PMC PMC Public Access (View-Only) DOI: 10.1128/cmr.00048-25 PMC: PMC12697141

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Genetic composition of facultatively anadromous brown trout Salmo trutta L. in a freshwater-lake system.

Hagen IJ, Paterson RA, Karlsson S, Diserud OH et al. • Journal of fish biology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1111/jfb.70553 PMC: PMC13602100

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Phylogenomics and species delimitation of an annual gentian complex on the Qinghai-Tibet Plateau.

Sun SS, Cai YQ, Xu Q, Si R et al. • BMC plant biology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1186/s12870-026-09326-8 PMC: PMC13602483

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Causal effects of gut microbiota on functional gastrointestinal disorders: a bidirectional Mendelian randomization study.

Cheng Y, Shu Q, Wang Z, Wu J et al. • Experimental biology and medicine (Maywood, N.J.) (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/ebm.2026.11023 PMC: PMC13601021

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A data-driven universal gut microbiome health assessment: a machine learning framework trained on large metagenomic data.

Kumar B, Lorusso E, Fosso B, Pesole G • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1925500 PMC: PMC13601785

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Indigenous Trichoderma species multi-mechanistic antagonism against Fusarium root disease in Coffea arabica: volatile-mediated inhibition, morphological, and molecular profiling.

Al-Shahrani SM, Al-Askar AA, Hyde KD, Al-Otibi F • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1899216 PMC: PMC13602967

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Genomic epidemiology of Salmonella Typhimurium in Guizhou, China (2019-2023): high prevalence of MDR, plasmid-associated resistance, and shared genomic lineages.

Zhu G, You L, Wu L, Liu Y et al. • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1787569 PMC: PMC13602968

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Projected Non-Monotonic Changes in the Potential Suitable Range of Phyllanthus emblica in China Under Future Climate Scenarios.

Xiang Y, Yang H, Li S, Yang Q et al. • Biology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3390/biology15181600 PMC: PMC13604418

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