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Using Network-Based Machine Learning to Predict Transcription Factors Involved in Drought Resistance

Chirag Gupta, Venkategowda Ramegowda, Supratim Basu, Andy Pereira • Frontiers in Genetics (2021)

Gene regulatory networks underpin stress response pathways in plants. However, parsing these networks to prioritize key genes underlying a particular trait is challenging. Here, we have built the Gene Regulation and Association Network (GRA...

DOAJ Open Access (DOAJ) DOI: 10.3389/fgene.2021.652189

Learning metal microstructural heterogeneity through spatial mapping of diffraction latent space features

Mathieu Calvat, Chris Bean, Dhruv Anjaria, Hyoungryul Park et al. • npj Computational Materials (2025)

Abstract To leverage advancements in machine learning for metallic materials design and property prediction, it is crucial to develop a data-reduced representation of metal microstructures that surpasses the limitations of current physics-b...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41524-025-01770-8

Introduction to Machine Learning

Richard J. Roiger • Chapman & Hall/CRC eBooks (2020)

R is one of the top-rated problem-solving tools for machine learning, data science, data analytics, data mining, and statistical analysis. R ’s popularity has resulted in the development of thousands of tutorials. Unfortunately, it’s easy t...

OPENALEX DOI: https://doi.org/10.1201/9781003006695-1

Using a nested anomaly detection machine learning algorithm to study the neutral triple gauge couplings at an e+e− collider

Ji-Chong Yang, Yu-Chen Guo, Li-Hua Cai • Nuclear Physics B (2022)

Anomaly detection algorithms have been proved to be useful in the search of new physics beyond the Standard Model. However, a prerequisite for using an anomaly detection algorithm is that the signal to be sought is indeed anomalous. This do...

DOAJ Open Access (DOAJ) DOI: 10.1016/j.nuclphysb.2022.115735

A synergistic enhancement of the Ivy algorithm for GAN-based imbalanced classification

Hanjie Xu, Jian Xiong, Jinyu Wu, Xianlai Zhou et al. • Scientific Reports (2025)

Abstract The Ivy Algorithm (IVYA), a swarm intelligence algorithm inspired by plant growth, presents a novel framework for optimization. To unlock its full potential in complex, high-dimensional problems, it is crucial to address the fundam...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41598-025-32510-z

Bypassing the Kohn-Sham equations with machine learning

Felix Brockherde, Leslie Vogt-Maranto, Li Li, Mark E. Tuckerman et al. • Nature Communications (2017)

Last year, at least 30,000 scientific papers used the Kohn-Sham scheme of density functional theory to solve electronic structure problems in a wide variety of scientific fields. Machine learning holds the promise of learning the energy fun...

OPENALEX cc-by DOI: https://doi.org/10.1038/s41467-017-00839-3 PMC: 5636838

Immunogenic cell death-related macrophage gene model for prognostic prediction in glioblastoma

Yiming Mao, Ting Li, Wenqiang Lu, Chunhong Li et al. • Discover Oncology (2025)

Abstract Glioblastoma (GBM) is an extremely aggressive and diverse type of brain tumor that is associated with a poor prognosis. Immunogenic cell death (ICD) is a particular form of cellular demise that is closely linked to antineoplastic i...

DOAJ Open Access (DOAJ) DOI: 10.1007/s12672-025-03557-1

A 9-mRNA signature measured from whole blood by a prototype PCR panel predicts 28-day mortality upon admission of critically ill COVID-19 patients

Claire Tardiveau, Claire Tardiveau, Guillaume Monneret, Guillaume Monneret et al. • Frontiers in Immunology (2022)

Immune responses affiliated with COVID-19 severity have been characterized and associated with deleterious outcomes. These approaches were mainly based on research tools not usable in routine clinical practice at the bedside. We observed th...

DOAJ Open Access (DOAJ) DOI: 10.3389/fimmu.2022.1022750

Quantum algorithms for matrix geometric means

Nana Liu, Qisheng Wang, Mark M. Wilde, Zhicheng Zhang • npj Quantum Information (2025)

Abstract Matrix geometric means between two positive definite matrices can be defined from distinct perspectives—as solutions to certain nonlinear systems of equations, as points along geodesics in Riemannian geometry, and as solutions to c...

DOAJ Open Access (DOAJ) DOI: 10.1038/s41534-025-00973-7

Very Deep Convolutional Neural Networks for Complex Land Cover Mapping Using Multispectral Remote Sensing Imagery

Masoud Mahdianpari, Bahram Salehi, Mohammad Rezaee, Fariba Mohammadimanesh et al. • Remote Sensing (2018)

Despite recent advances of deep Convolutional Neural Networks (CNNs) in various computer vision tasks, their potential for classification of multispectral remote sensing images has not been thoroughly explored. In particular, the applicatio...

DOAJ Open Access (DOAJ) DOI: 10.3390/rs10071119

Machine Learning for Electrocatalyst and Photocatalyst Design and Discovery

Haoxin Mai, Tu C. Le, Dehong Chen, David Alan Winkler et al. • Chemical Reviews (2022)

Electrocatalysts and photocatalysts are key to a sustainable future, generating clean fuels, reducing the impact of global warming, and providing solutions to environmental pollution. Improved processes for catalyst design and a better unde...

OPENALEX DOI: https://doi.org/10.1021/acs.chemrev.2c00061

Generative Lagrangian data assimilation for ocean dynamics under extreme sparsity

Niloofar Asefi, Leonard Lupin-Jimenez, Tianning Wu, Ruoying He et al. • Machine Learning. Earth (2025)

Reconstructing ocean dynamics from observational data is fundamentally limited by the sparse, irregular, and Lagrangian nature of spatial sampling, particularly in subsurface and remote regions. This sparsity poses significant challenges fo...

DOAJ Open Access (DOAJ) DOI: 10.1088/3049-4753/ae0b70

Exploring Traffic Patterns Through Network Programmability: Introducing SDNFLow, a Comprehensive OpenFlow-Based Statistics Dataset for Attack Detection

Jorge Buzzio-Garcia, Jaime Vergara, Santiago Rios-Guiral, Christian Garzon et al. • IEEE Access (2024)

In the contemporary cybersecurity landscape, robust attack detection mechanisms are important for organizations. However, the current state of research in Software-Defined Networking (SDN) suffers from a notable lack of recent SDN-OpenFlow-...

DOAJ Open Access (DOAJ) DOI: 10.1109/ACCESS.2024.3378271

Cybersecurity in Smart Grids: Detecting False Data Injection Attacks Utilizing Supervised Machine Learning Techniques

Anwer Shees, Mohd Tariq, Arif I. Sarwat • Energies (2024)

By integrating advanced technologies and data-driven systems in smart grids, there has been a significant revolution in the energy distribution sector, bringing a new era of efficiency and sustainability. Nevertheless, with this advancement...

DOAJ Open Access (DOAJ) DOI: 10.3390/en17235870

Burnout Risk Profiles in Psychology Students: An Exploratory Study with Machine Learning

M. Graça Pereira, Martim Santos, Renata Magalhães, Cláudia Rodrigues et al. • Behavioral Sciences (2025)

University students are at increased risk of developing burnout and psychological distress from high academic workloads and performance expectations. The purpose of this study is to analyze the relationship between psychological and lifesty...

DOAJ Open Access (DOAJ) DOI: 10.3390/bs15040505

WEKA: a machine learning workbench

Geoffrey Holmes, A. Donkin, Ian H. Witten • Australian and New Zealand Intelligent Information Systems Conference (ANZIIS) (2002)

WEKA is a workbench for machine learning that is intended to aid in the application of machine learning techniques to a variety of real-world problems, in particular, those arising from agricultural and horticultural domains. Unlike other m...

OPENALEX DOI: https://doi.org/10.1109/anziis.1994.396988

Using machine learning to predict persecutory beliefs based on aetiological models of delusions identified in a systematic literature search

Saskia Denecke, Felix Strakeljahn, Antonia Bott, Tania M. Lincoln • Communications Psychology (2025)

Abstract Aetiological models of delusions propose a broad range of predictors. The extent to which these predictors explain variance in persecutory beliefs across the continuum requires systematic investigation. As part of a previous review...

DOAJ Open Access (DOAJ) DOI: 10.1038/s44271-025-00311-9