Academic Articles & Research Papers

Long-term salinity is associated with deteriorated soil properties, rhizosphere microbiome restructuring, and elevated wheat crown rot: evidence from a 19-year gradient experiment and a 3-year remediation verification.

Wang Y, Han S, Liu X, Dang H et al. • Frontiers in plant science (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fpls.2026.1992882 PMC: PMC13739487

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The microbiome bottleneck in seahorse aquaculture: a conceptual framework linking biofilm ecology, probiotics and larval survival.

Wen J, Yao Y, Hu X, Li R et al. • Animal microbiome (2026)

PMC PMC Public Access (View-Only) DOI: 10.1186/s42523-026-00609-x PMC: PMC13729585

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Temporal transcriptomic and microbiome changes in American bison during experimental SARS-CoV-2 challenge.

Petry B, Boggiatto PM, Buckley A, Cassmann ED et al. • G3 (Bethesda, Md.) (2026)

PMC PMC Public Access (View-Only) DOI: 10.1093/g3journal/jkag231 PMC: PMC13732425

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Multiomics reveals alterations in the gut microbiome, host proteins, and host metabolites correlating with SADS-CoV pathogenicity and the immune response in piglets.

Tang X, Chao H, Li C, Sun J et al. • Virologica Sinica (2026)

PMC PMC Public Access (View-Only) DOI: 10.1016/j.virs.2026.10.001 PMC: PMC13731438

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The Potential Role of Gut Microbiome Dysbiosis and Functional Reprogramming in Colorectal Liver Metastasis via the Gut-Liver Axis.

Sheng Y, Dai X, Lu J, Zhang H et al. • Cancer reports (Hoboken, N.J.) (2026)

PMC PMC Public Access (View-Only) DOI: 10.1002/cnr2.70738 PMC: PMC13732294

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Continuous fermentation-derived fecal microbiota transplantation improves intestinal barrier function and reshapes gut microbiota in weaned piglets.

Chen J, Guo Z, Liu M, Wei Y et al. • Animal microbiome (2026)

PMC PMC Public Access (View-Only) DOI: 10.1186/s42523-026-00598-x PMC: PMC13733099

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Microbiome-mitochondria crosstalk in neuro-oncology: molecular mechanisms, immunometabolic reprogramming, and therapeutic opportunities.

Dash D, Rajak M, Manothiya P, Koiri RK • Frontiers in microbiomes (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/frmbi.2026.1983174 PMC: PMC13732321

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Cross-Cohort Transcriptomic and Oral Microbiome Analyses Identify Ferroptosis-Associated Signatures in Periodontitis and Oral Squamous Cell Carcinoma.

Qiu C, She P, Wu L • International journal of genomics (2026)

PMC PMC Public Access (View-Only) DOI: 10.1155/ijog/7538825 PMC: PMC13732103

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Phage endolysin enables targeted manipulation of the small intestinal microbiota and uncovers niche overlap between oral and butyrate-producing taxa.

Garneau JR, Altenried A, Teo Y, Wu X et al. • NPJ biofilms and microbiomes (2026)

PMC PMC Public Access (View-Only) DOI: 10.1038/s41522-026-01087-4 PMC: PMC13737061

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Rethinking the soil core microbiome.

Lee J, Aponte Rolón B, de Lorimier P, Ané JM et al. • The New phytologist (2026)

PMC PMC Public Access (View-Only) DOI: 10.1111/nph.71509 PMC: PMC13738671

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Psychoactive Pollutant Impacts Baseline Immune Traits but Not Behavior and Microbiome in a Fish.

Melhado G, Eastment RV, Marques FZ, Aich U et al. • Environmental science & technology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1021/acs.est.6c12057 PMC: PMC13738779

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Large-scale metagenomic characterization of the vaginal microbiome and uropathogens in women with recent bacterial vaginosis and urinary tract infections.

Whang SN, Wang X, Thomas-White KJ, Olmschenk G et al. • Nature communications (2026)

PMC PMC Public Access (View-Only) DOI: 10.1038/s41467-026-78217-1 PMC: PMC13737110

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The cervicovaginal microbiome as a candidate correlate and potential predictor of HPV clearance and treatment response after HSIL therapy: a scoping review.

Mwesige B, Angucia B, Mbodi L, Mwazha A et al. • Frontiers in oncology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fonc.2026.1972845 PMC: PMC13736086

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Integrated microbiome and metabolome analysis reveals mechanisms of Fusarium wilt resistance in banana rhizosphere soil under different continuous cropping durations.

Zhao M, Mo T, Huang X, He H et al. • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1853743 PMC: PMC13736750

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Phage-directed precision microbiome medicine: engineering pathobiont depletion, synbiotic succession, microbial-function editing, metabolite host signaling, neurophagomics, and durable ecological state control in gut dysbiosis associated diseases.

Saeed U, Piracha ZZ • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1964616 PMC: PMC13736054

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Full-length 16S rRNA gene sequencing resolution reveals variable compositional features of medfly gut microbiomes.

Mason CJ, Hansen TE, Newell N, Corpuz RL et al. • ISME communications (2026)

PMC PMC Public Access (View-Only) DOI: 10.1093/ismeco/ycag292 PMC: PMC13738209

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The Oral Microbiome: A Silent Contributor to Systemic Health and Disease National Institutes of Health 2024 Workshop.

Riscuta G, Wali A, Mongodin EF, Verma M et al. • Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology (2026)

PMC PMC Public Access (View-Only) DOI: 10.1158/1055-9965.EPI-25-1553 PMC: PMC13530980

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Gut microbiome-immune-metabolic mechanisms in cerebrovascular disease: evidence-graded insights from cerebral small vessel disease, ischemic stroke, and intracerebral hemorrhage.

Ren C, Xiu Y, Zhang Y, Wang X et al. • Frontiers in microbiology (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/fmicb.2026.1927904 PMC: PMC13529723

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Human milk microbiome as a modulator of the early-life gut-brain axis: mechanisms and translational opportunities for neurodevelopment.

Alnuaimi F, Yassin LK, Alketbi S, Skrabulyte-Barbulescu J et al. • Journal of translational medicine (2026)

PMC PMC Public Access (View-Only) DOI: 10.1186/s12967-026-08844-1 PMC: PMC13536827

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The gut microbiome as a modifiable contributor to autism spectrum disorder: a precision gut-immune-brain perspective.

Sclabassi E, Hur J, Ling J, Gao Y • Frontiers in child and adolescent psychiatry (2026)

PMC PMC Public Access (View-Only) DOI: 10.3389/frcha.2026.1900538 PMC: PMC13533910

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